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Whole genome sequencing of Escherichia coli in healthy commercial pigs

Lead organisation(s): 
University of Technology and NSW Department of Primary Industries Partnership (AusGEM)
Project type: 
Research
Status: 
Complete
Summary: 
Intensive pig production introduces a significant number of bacteria, most notably E. coli, into the environment through pig faeces. E. coli can cause illness in both humans and livestock and poses a risk to the profitability of animal agriculture. By performing whole genome sequencing of E. coli and the other microbes frequently found in pigs, AusGEM is helping track the spread of resistance genes through agriculture, humans, and the environment.
Timeframe: 
AusGEM Phases 1 and 2 ran 2014-2019. AusGEM Phase 3 will commence in 2020.
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